PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1936
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GeBP
Protein Properties Length: 308aa    MW: 34472.5 Da    PI: 4.7779
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1936genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.98.2e-30109206297
                         DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkeps 79 
                                    lfqr+ws eDei++L ++i+f+ k g     ++ i +f++fvk+s+s++v+ sql eKirr+KkK+k   +++k+gk ++
  evm.model.AsparagusV1_03.1936 109 LFQRIWSLEDEIAILEAMIEFEPKYGPikLNTAGIRDFHDFVKGSLSLEVNGSQLHEKIRRIKKKYKSVAARVKNGKAVK 188
                                    79************************85455669********************************************** PP

                         DUF573  80 fskehdqkifelskkiWg 97 
                                    f k+ d+k++elskk+Wg
  evm.model.AsparagusV1_03.1936 189 FGKPLDEKVYELSKKVWG 206
                                    *****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAKKQPPPPP APRSSSSEEE EESSSDEEPI ISRPIPQTPA QNQEQDDEET DDESESDSDE  60
EEDDDEEDEE PLSNAKKPRS ISTPASPAPK PLDAGEKSNG KRNANGKSLF QRIWSLEDEI  120
AILEAMIEFE PKYGPIKLNT AGIRDFHDFV KGSLSLEVNG SQLHEKIRRI KKKYKSVAAR  180
VKNGKAVKFG KPLDEKVYEL SKKVWGMENN SEAKNEGKAA KSKKAVKADG GGGSSKREYP  240
FLKDCLANMR GGISAELWDA INPENARYLE SKFKKLKVME IKDKIREMDL MKEALERFVE  300
DIERMTD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-18GeBP family protein