PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1712 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 309aa MW: 35645.1 Da PI: 6.7904 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.8 | 3.8e-18 | 110 | 163 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++++LA+ lgL+ rqV +WFqNrRa++k evm.model.AsparagusV1_03.1712 110 KKRRLNIEQVRTLEKNFEIANKLEPERKTQLATALGLQPRQVAIWFQNRRARWK 163 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.2 | 1.7e-41 | 109 | 199 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80 ekkrrl+ eqv++LE++Fe +kLeperK++la++Lglqprqva+WFqnrRAR+ktkqlE+dy++Lkr++da+++ene+L evm.model.AsparagusV1_03.1712 109 EKKRRLNIEQVRTLEKNFEIANKLEPERKTQLATALGLQPRQVAIWFQNRRARWKTKQLERDYDVLKRQFDAIRSENEAL 188 69****************************************************************************** PP HD-ZIP_I/II 81 ekeveeLreel 91 ++++++L++e+ evm.model.AsparagusV1_03.1712 189 QTHNKKLQAEI 199 ********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MPHQPFSLSL SLSFSYPFQH TASLSPMLNL DQMGCNSSPF FSPNFLLQIQ TPHDQLHQDL 60 PSLPQEFRGS IHNKLELHKM LGKRSMSFSA INHNCEEDEL SDDCSLTGEK KRRLNIEQVR 120 TLEKNFEIAN KLEPERKTQL ATALGLQPRQ VAIWFQNRRA RWKTKQLERD YDVLKRQFDA 180 IRSENEALQT HNKKLQAEIL ALKGRETSEM MINLNKETEG SCSNRSENSS EHNLDVSRTP 240 QPHIETSPIN PRQSIPFFPS IRPSSMIQLF HCPKTEQNTV SDENFSNLLC GIDDQSGFWQ 300 WPDQQNFH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 158 | 166 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 3e-86 | HD-ZIP family protein |