PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1207 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | GRF | ||||||||
Protein Properties | Length: 198aa MW: 23603.1 Da PI: 9.4921 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 75.9 | 4.2e-24 | 65 | 108 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rC+RtDGKkWRCs+++ ++k+CErH+hrg++ srk +e evm.model.AsparagusV1_03.1207 65 DPEPWRCKRTDGKKWRCSKEAFLDSKYCERHMHRGKKSSRKLVE 108 79**************************************9986 PP | |||||||
2 | QLQ | 35.7 | 2.7e-13 | 10 | 43 | 2 | 35 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT +Ql +++ Q l++ y++++ PvP++L+ + evm.model.AsparagusV1_03.1207 10 PFTESQLKEFELQTLIFNYIISGIPVPSHLITHF 43 8*****************************9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MMMMVNQRHP FTESQLKEFE LQTLIFNYII SGIPVPSHLI THFKRSIYFF DHYPSMRFVK 60 KTEEDPEPWR CKRTDGKKWR CSKEAFLDSK YCERHMHRGK KSSRKLVEFP KLALNNTFRS 120 IDNDTQLILG PSSPCNQSYK CYNFFKEESE EEKRKKEAQK AKPLLCLFSE SDEKRKRSWV 180 DTEEAYYSKT QLSISIL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 1e-29 | GRF family protein |