PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1160 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | Dof | ||||||||
Protein Properties | Length: 242aa MW: 26016.8 Da PI: 8.757 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 42.9 | 1.1e-13 | 23 | 73 | 13 | 61 |
zf-Dof 13 stntkfCyynnyslsqPryfCkaCrryW.t.kGGalrnvPvGggrrknkks 61 t+fCyynnyslsqPr+f ++ +r t + +l v +++rknk+ evm.model.AsparagusV1_03.1160 23 RVRTQFCYYNNYSLSQPRHFLQGVQRATdTrAPSTLPECSVAAAARKNKRL 73 468***********************75241457899999********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MAQQAARQRL PQPQQLSARA ATRVRTQFCY YNNYSLSQPR HFLQGVQRAT DTRAPSTLPE 60 CSVAAAARKN KRLQETSPAP QPSSSSRAAA AATVTLGLGG LIPHSDQLST GFVNNNSSNL 120 QSCFLNNEYP ASFGSQAASL LVSSMKQPRK VEDRYAQPAL PYEGPQQGYE SLNLGFVKDV 180 KVEDGNNLNN MGNNSAGDQW QANYPFEALN GASDSSYMYW SSAMGGSVWP DPSSSSVAPL 240 I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.1 | 1e-09 | Dof family protein |