PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1057 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | GRAS | ||||||||
Protein Properties | Length: 512aa MW: 57090.4 Da PI: 4.989 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 357.2 | 2.5e-109 | 135 | 505 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn....ss 75 lv+lLl+cAeav+ +d++la ++ +++ la ++gd+++R+ ++f+ +L++rl+ ++ +++ +l++ +t+++n + evm.model.AsparagusV1_03.1057 135 LVHLLLACAEAVACRDTTLAASIFSQIWPLADQNGDSLKRVCFHFAVGLKSRLSLlQTVGVSGSLNTASTNKDNpivtKE 214 68****************************************************9889999999*999999999998888 PP GRAS 76 eelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgsk 155 e++ a++ ++e++P++ f++++aN I +a++g++ +Hi+D+++s+ +QW +L+q Las +egpp++RiTg+ s + ++ evm.model.AsparagusV1_03.1057 215 EKMEAFHHLYETTPYISFAFMAANDSICQAAKGKDYLHIVDLGMSHAIQWHNLIQMLASHSEGPPRIRITGITS-SDSRI 293 88999999******************************************************************.44577 PP GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksls 235 le+ + L k A+++gv++ef++ +++ + l+ e+L++++gE+l+ n++++lhr ++e+ + + +vL ++k+l+ evm.model.AsparagusV1_03.1057 294 SDLESNMKILLKNANTIGVHIEFRI--MNESSLLTAENLDIRQGETLVFNSIMHLHRYVKETRGSLK---AVLVAIKKLK 368 888888889999************8..58999***************************77776666...9********* PP GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekW 315 P+++++veq+a+hn++ Fl+rfle+l+yysa+fdslea+l r s r+k+E+ +++ +i+n++aceg er+erhe++ +W evm.model.AsparagusV1_03.1057 369 PELFTIVEQDANHNGPFFLARFLESLHYYSAVFDSLEASLTRSSLRRMKIENSYFADAIRNIIACEGGERVERHERADQW 448 ******************************************************************************** PP GRAS 316 rerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 r++l++aGF+ v +++ ++q+k+l++ ++ dgy+ +e+g+l+lgWk+rp++++SaW+ evm.model.AsparagusV1_03.1057 449 RRQLGRAGFQGVGIES--VSQVKMLVSAYNCDGYTTGSEKGCLLLGWKGRPIMWASAWK 505 ************9976..89**************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MNIPPSYSSL STQQFPFTSV QSDEINFDEI LNKDMAIRRF CPERMDQDPD LKDYLFEIET 60 WSSSFDSSSP PCSGCDDEDS SFIDSVINTS LFEELPESTD NGFASYLEDT TMQPVLMDNA 120 DPDTAPASIN EGLELVHLLL ACAEAVACRD TTLAASIFSQ IWPLADQNGD SLKRVCFHFA 180 VGLKSRLSLL QTVGVSGSLN TASTNKDNPI VTKEEKMEAF HHLYETTPYI SFAFMAANDS 240 ICQAAKGKDY LHIVDLGMSH AIQWHNLIQM LASHSEGPPR IRITGITSSD SRISDLESNM 300 KILLKNANTI GVHIEFRIMN ESSLLTAENL DIRQGETLVF NSIMHLHRYV KETRGSLKAV 360 LVAIKKLKPE LFTIVEQDAN HNGPFFLARF LESLHYYSAV FDSLEASLTR SSLRRMKIEN 420 SYFADAIRNI IACEGGERVE RHERADQWRR QLGRAGFQGV GIESVSQVKM LVSAYNCDGY 480 TTGSEKGCLL LGWKGRPIMW ASAWKVNSSH S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 3e-80 | GRAS family protein |