PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.664 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 198aa MW: 21544.4 Da PI: 9.4874 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 40.3 | 9.4e-13 | 42 | 74 | 96 | 128 |
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v +kk Lvfy g+apkg kt+W+mheyrl evm.model.AsparagusV1_02.664 42 SPKPVAIKKALVFYAGKAPKGDKTNWIMHEYRL 74 45679**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MGTKSGIFSH QETGNIRTGR DRTGQPVGVT GRRPEPIKPV GSPKPVAIKK ALVFYAGKAP 60 KGDKTNWIMH EYRLADVDRS ARKKNSLRKP NIAPHVTSAM PPPPTFPPTK DFSYFGPSES 120 LPMLHADSSC SSHVLSPDLT CESKEAESQL RWEELGRALG APFNYGDATV PFPPLDCGAQ 180 FSNDPLQDLF ASLQRPF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 3e-38 | NAC family protein |