PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.2209

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 1188aa MW: 132183 Da PI: 6.4422

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.2209	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.7	4.1e-48	306	439	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyat.gkrkn 75 l+pGfrFhPtdeelv++yLk+kv+g +l++ ++i e+d+yk++PwdLp + +++ ++ew+fF++ d+ky++ ++++n evm.model.AsparagusV1_02.2209 306 LAPGFRFHPTDEELVSYYLKRKVAGLPLHV-DAIGEIDLYKWDPWDLPpRsrlNLSMLSTEWFFFCTLDRKYNRsSHQNN 384 579*************************.99**********9645554444668********97367888 PP NAM 76 ratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 rat++g+Wk+tg d++v ++ +++ +g+kktLvf++grap g++t+Wvmheyrle evm.model.AsparagusV1_02.2209 385 RATAKGFWKSTGIDRSVRHRtSEKIIGMKKTLVFHTGRAPGGQRTNWVMHEYRLE 439 9*************9966777**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 1188 aa Download sequence
MAAATQHNIY CHRTPPHKIL SVPSRDIKAC LVSHSTQNQI SNSDADPFTP LPQTLANPRG 60 SETLTLASPD EPSVAARRLA PRVPLPRPRR GASSGYFLRR RSPALPLPRS DAIPEVELYR 120 MREPVDLLSS PTPAGSRGSP TPSGSSSATV STASTTAPRP GRSGHRRGVT GSARAGIGPV 180 FMPTTSRSKT HCVMRKSSCS TSAERPRGRG PTGSCTSFGS RRMIGATKVF KKNVVGNKNA 240 DERLAPLMEE RRDEEDRDQT PTAEREGGHA NDFEQGTTEA VHGTDLSTIS CEASSLNLNP 300 PSDGLLAPGF RFHPTDEELV SYYLKRKVAG LPLHVDAIGE IDLYKWDPWD LPPRSRLNLS 360 MLSTEWFFFC TLDRKYNRSS HQNNRATAKG FWKSTGIDRS VRHRTSEKII GMKKTLVFHT 420 GRAPGGQRTN WVMHEYRLED NEQNTKGSSF VVCRIFHKSG AGPRKPLALY GTEPFVELEE 480 TAQDLGPARK YLQVPDVNVD TVPSVVVADV VDKNCEHALK NSEQVTTART YDIGSKVEIA 540 YIRDKLPVAW YMATVIKVID ERVLLVEYEN LKSEDDTLLS EIVSAQYIRP HPPPTAEARN 600 FHLLDEVEAF YNGGWWPGVV AKVIADSRYN VKFMHWEEEI EFNHTELRLL YDWVDGRWIQ 660 ASQDKPIESQ DLGGGKSIGH TQSLHECNSA PTCGFPGSST PSSGMRDEAP SMTNENENLA 720 RLTFESQQDI FQPCKKAKKG ETSDNNTQLL DLRGNENSSA VKMGFDIRTP IVEEEPNIRT 780 PMVEEEPNIR IKALVEKGCF SSPSKKNDVV SADSITMSGE INEDPPVSDK LSQELVSVHK 840 PLSSNGEESH EGRSGKNEFL QMGQESGAHX XXXVPELDRE GDEGAGQYTA RDKIRKNCIR 900 IIDPPLEGVS IGTQGGITEG LSSALCVVCS DSDVEAQELF NVTSSSDSSL VETSTSNAQP 960 SEALDNIFRS TEGEHSPKSV PVEKSPSPEQ SALPFEKCSP MWDSFESMEA FRVMPQRPHF 1020 RPLEKLCKDF REGMAIGLMV TFSNLVNNID RLAISDSFHK FDGILKTLDH LERYGFDVQC 1080 IRARLLELTR LKNNQDRLAD EGSTLKILLG KKQKKNEQLN KQIESFNNVS EELEKSLTRL 1140 REEKSNIFKR KRENDSELHR LEMDSRRIED ELLSAQHDFE AARRALS*

Sequence ? help Back to Top

Protein Sequence Length: 1188 aa Download sequence

MAAATQHNIY CHRTPPHKIL SVPSRDIKAC LVSHSTQNQI SNSDADPFTP LPQTLANPRG  60
SETLTLASPD EPSVAARRLA PRVPLPRPRR GASSGYFLRR RSPALPLPRS DAIPEVELYR  120
MREPVDLLSS PTPAGSRGSP TPSGSSSATV STASTTAPRP GRSGHRRGVT GSARAGIGPV  180
FMPTTSRSKT HCVMRKSSCS TSAERPRGRG PTGSCTSFGS RRMIGATKVF KKNVVGNKNA  240
DERLAPLMEE RRDEEDRDQT PTAEREGGHA NDFEQGTTEA VHGTDLSTIS CEASSLNLNP  300
PSDGLLAPGF RFHPTDEELV SYYLKRKVAG LPLHVDAIGE IDLYKWDPWD LPPRSRLNLS  360
MLSTEWFFFC TLDRKYNRSS HQNNRATAKG FWKSTGIDRS VRHRTSEKII GMKKTLVFHT  420
GRAPGGQRTN WVMHEYRLED NEQNTKGSSF VVCRIFHKSG AGPRKPLALY GTEPFVELEE  480
TAQDLGPARK YLQVPDVNVD TVPSVVVADV VDKNCEHALK NSEQVTTART YDIGSKVEIA  540
YIRDKLPVAW YMATVIKVID ERVLLVEYEN LKSEDDTLLS EIVSAQYIRP HPPPTAEARN  600
FHLLDEVEAF YNGGWWPGVV AKVIADSRYN VKFMHWEEEI EFNHTELRLL YDWVDGRWIQ  660
ASQDKPIESQ DLGGGKSIGH TQSLHECNSA PTCGFPGSST PSSGMRDEAP SMTNENENLA  720
RLTFESQQDI FQPCKKAKKG ETSDNNTQLL DLRGNENSSA VKMGFDIRTP IVEEEPNIRT  780
PMVEEEPNIR IKALVEKGCF SSPSKKNDVV SADSITMSGE INEDPPVSDK LSQELVSVHK  840
PLSSNGEESH EGRSGKNEFL QMGQESGAHX XXXVPELDRE GDEGAGQYTA RDKIRKNCIR  900
IIDPPLEGVS IGTQGGITEG LSSALCVVCS DSDVEAQELF NVTSSSDSSL VETSTSNAQP  960
SEALDNIFRS TEGEHSPKSV PVEKSPSPEQ SALPFEKCSP MWDSFESMEA FRVMPQRPHF  1020
RPLEKLCKDF REGMAIGLMV TFSNLVNNID RLAISDSFHK FDGILKTLDH LERYGFDVQC  1080
IRARLLELTR LKNNQDRLAD EGSTLKILLG KKQKKNEQLN KQIESFNNVS EELEKSLTRL  1140
REEKSNIFKR KRENDSELHR LEMDSRRIED ELLSAQHDFE AARRALS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	5e-59	NAC family protein