PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.2001

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bZIP

Protein Properties

Length: 476aa MW: 51482.5 Da PI: 7.0222

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.2001	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.5	3.9e-10	188	224	4	40
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k rr+++NReAAr+sR+RKka++++Le +L + evm.model.AsparagusV1_02.2001 188 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLAQ 224 6889************************974333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MASRGGGVGG GGGGGGGGIG VENAKEATID MPSFVSSIST AGNNMHNSRI SDIRALEQSL 60 GFRLEDIADL SRNPLFNQKS GTQATGSDPL QFSSFTAQFA SKDTIPSAAR VGSVTLPQQK 120 GQPSNLGSIT SNPVENWGES TMAEGSPRTD TSTDIDTDEK NQQFEQGHLA TIAASDSSDR 180 SKEKTSDQKT LRRLAQNREA ARKSRLRKKA YVQQLESSRV KLAQLEQELQ RARQQGIFIS 240 SSGDQSHSMS GNGALAFDME YARWLEDQNR QINELRAAVN AHASDTDLRI IVDGIMVHYS 300 EMFKLKSTAA KADVFHMLSG MWKTPAERCF LWLGGFRSSE LLKLLANQLE PLTEQQLEGI 360 CNLQQSSQQT EDALSQGMEA LQQSLADTLA SGSSGPTAGG SGNVANYVGQ MAMAMGKLGT 420 LENFLCQADN LRLQTLQQLH RILTTRQAAR ALLAIHDYHS RLRALSSLWL ARPKE*

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MASRGGGVGG GGGGGGGGIG VENAKEATID MPSFVSSIST AGNNMHNSRI SDIRALEQSL  60
GFRLEDIADL SRNPLFNQKS GTQATGSDPL QFSSFTAQFA SKDTIPSAAR VGSVTLPQQK  120
GQPSNLGSIT SNPVENWGES TMAEGSPRTD TSTDIDTDEK NQQFEQGHLA TIAASDSSDR  180
SKEKTSDQKT LRRLAQNREA ARKSRLRKKA YVQQLESSRV KLAQLEQELQ RARQQGIFIS  240
SSGDQSHSMS GNGALAFDME YARWLEDQNR QINELRAAVN AHASDTDLRI IVDGIMVHYS  300
EMFKLKSTAA KADVFHMLSG MWKTPAERCF LWLGGFRSSE LLKLLANQLE PLTEQQLEGI  360
CNLQQSSQQT EDALSQGMEA LQQSLADTLA SGSSGPTAGG SGNVANYVGQ MAMAMGKLGT  420
LENFLCQADN LRLQTLQQLH RILTTRQAAR ALLAIHDYHS RLRALSSLWL ARPKE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-138	bZIP family protein