PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1970 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HSF | ||||||||
Protein Properties | Length: 252aa MW: 29103.2 Da PI: 8.2833 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 113.8 | 1.1e-35 | 25 | 117 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 Fl+k+y++++d+ +++++sw e++ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF evm.model.AsparagusV1_02.1970 25 FLTKTYQLVDDPCTDHIVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEF 95 9****************************************************************999.........*** PP EESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 82 khksFkkgkkellekikrkkse 103 +++ F+kg+k+ll++i+r+k++ evm.model.AsparagusV1_02.1970 96 ANEFFRKGQKHLLSEIHRRKTT 117 *******************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MAFLVERCGE MVVSMDSHKA VPAPFLTKTY QLVDDPCTDH IVSWGEDEAT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVA DRWEFANEFF RKGQKHLLSE IHRRKTTNYS 120 QPPHHFQPHQ LPPPPNDHHH HVVERSSYWI NEPPLLPPIP GTNSDYLSAL SEDNQRLRKK 180 NSMLLSELTH MKKLYNDIIY FIQNHVTPRP ARVVEVGPSS VTIMEEPVVA ESSIKLFGVA 240 LNGKKRLHTE G* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 8e-85 | HSF family protein |