PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1837
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 341aa    MW: 37799.4 Da    PI: 8.243
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1837genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.5e-121465955
                            AP2  9 dkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                                   ++++gr++A+++d  ++n+   k+ k+++lg ++ +e Aa+a++ a++k++g
  evm.model.AsparagusV1_02.1837 14 HRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 65
                                   789**********766644468557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MKRFFSYALS DEAHRWTGRY EAHLWDKSTW NQNQNKKGKQ VYLGAYDDEE AAARAYDLAA  60
LKYWGAGTLI NFPVSDYTRD LEEMQMISKE DYLVSLRRKS SAFSRGFPKC RGVARQSQGT  120
RWETSFGQMP GCTDAPAGGK YGSVGSFGME RKIDLTNYIR WWQPNKSRQL ESEEDIGKDL  180
RALGCSPIQK TEPYQLPSLG LPNKGKAHAT PSLSACGILS KSVAFKNFVD KSSEIETSTC  240
RNNEMDRGKS AVPLLFAGGS ELDVDRSAGV TSGLCDTTVQ RTPYTFSPIF SEPLSTSWNP  300
VDPVSDPVLW STLVPPTSQS ITATMKKKDI DGAYSYQCQG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.19e-78AP2 family protein