PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1528
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 281aa    MW: 31900.8 Da    PI: 6.9566
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1528genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.87.2e-56181461129
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdee++++yL +k+++k++++  ++ evd++k+ePwdLp+k+k +ekewyfF++++k+y+tg r+nrat+s
  evm.model.AsparagusV1_02.1528  18 LPPGFRFHPTDEEIITNYLSEKIADKSFSA-LALGEVDLNKCEPWDLPNKAKMGEKEWYFFTQKEKRYPTGMRTNRATES 96 
                                    79*************************999.67***************99999*************************** PP

                            NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                    gyWkatgkdke++++ ++ lvg+kktLvfy+grapkgekt+Wvmhe+rle
  evm.model.AsparagusV1_02.1528  97 GYWKATGKDKEIYKSkGSVLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLE 146
                                    *************9856677***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MAEFTSQIPK EEEEYLVLPP GFRFHPTDEE IITNYLSEKI ADKSFSALAL GEVDLNKCEP  60
WDLPNKAKMG EKEWYFFTQK EKRYPTGMRT NRATESGYWK ATGKDKEIYK SKGSVLVGMK  120
KTLVFYRGRA PKGEKTNWVM HEFRLEGNHS HLYNLSTASK EDWVVVRVLH KNEAAKKNPS  180
TVQESACFAH PCTSSLSYLQ QDEAMERATA PVNANARHNS SSMSPFIGQR KIEQFSSSMA  240
TTSHDTGLSN DWNAEISSYD YGLSSGPFFD LENIWNYKGI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.21e-90NAC family protein