PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1331

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 319aa MW: 36185.5 Da PI: 5.1638

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1331	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101	1.7e-31	8	138	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr 76 pGf+F+P d+ l+++yL +k++g + l + + i+++d+y++ePw+Lp+ ++++++k++yfFs+r+ ++a++kr +r evm.model.AsparagusV1_02.1331 8 PGFEFNPGDDHLLTFYLPRKIAGGRdaLAIPNYlIRDFDVYSTEPWNLPRdtfRYQNKKKDMYFFSCRQPTSANSKRVQR 87 9********************99663443445**********9546677788889*************** PP NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+W d++v+ ++++vg k++L+f + k +++W+mhe++l evm.model.AsparagusV1_02.1331 88 TAGHGFWYGARGDEKVYY-ESQHVGYKTVLTFKYIKGGKEINSNWIMHEFHL 138 ****9999*9.9999*****989999999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MMEPPSCPGF EFNPGDDHLL TFYLPRKIAG GRDALAIPNY LIRDFDVYST EPWNLPRDTF 60 RYQNKKKDMY FFSCRQPTSA NSKRVQRTAG HGFWYGARGD EKVYYESQHV GYKTVLTFKY 120 IKGGKEINSN WIMHEFHLKP PENGNKFESK VLCRIHMNNT KKDSEGGADA ESGVAALIEQ 180 EEQGTASVVT NIKERPRKRK RVDVSSSLPS TSSSLPAFVP CKEAEALIST LDEKPHTVFE 240 QKEEVDERQV IEMLLKEHEV MTNHSMAAAE FHNSYEASSS LINVLPPTSQ DDGTWEDLDI 300 DVSTVSYLDE LMECFTDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	8e-25	NAC family protein