PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1290
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 426aa    MW: 48281.6 Da    PI: 4.6914
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1290genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.51e-30221492128
                            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratk 79 
                                     pGf F+P+d +lv +yL+++++g  ++  + ++++diy++ePw+Lp   +++ +ek ++fF++r+  +a++++ nr++ 
  evm.model.AsparagusV1_02.1290  22 FPGFNFKPSDVDLVAFYLRRRISGGMTPS-NLVRDLDIYSTEPWNLPgGLFQSeSEKYMFFFTRRHPISARSRKFNRTAG 100
                                    59************************999.89***************54444414556799999999999********** PP

                            NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                     g W+ + kdk+v++ +++++g +  ++f k +a +    t+W+mhe+rl
  evm.model.AsparagusV1_02.1290 101 CGLWHGSSKDKNVIH-GSQVIGYRLQFTFKKIDAGNqKIPTNWIMHEFRL 149
                                    ***************.9*************8755440458********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MEIQEVEGAD DLQRADPVLF QFPGFNFKPS DVDLVAFYLR RRISGGMTPS NLVRDLDIYS  60
TEPWNLPGGL FQSESEKYMF FFTRRHPISA RSRKFNRTAG CGLWHGSSKD KNVIHGSQVI  120
GYRLQFTFKK IDAGNQKIPT NWIMHEFRLN KTTNIDSLVL CKIFKRKHGE EGETDGLGAG  180
IALSDVCDGE EEKERFAKRR RIVESGGQKF LMDGYAETSS KNASSSLSSS SLHHEAPSVA  240
VEKPIQRQEQ TTTYESLEKR RQVEKQTQQE AYMADNSEKR YCRVDNTKAA DQPLVFKDEF  300
ASLEDLICLD DFPQWTTEFN ASPLVGDCDE TPFLPYEEQT ATEERLEMGK QVEEPDQQQG  360
VLAHYNEDTT EANSQSSLFN AVYESLFFDD SSPQDAKIDA SSSFFPCSDD LQNLGWAGLY  420
HSLMK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198202KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-26NAC family protein