PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.129
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 1000aa    MW: 107569 Da    PI: 5.2726
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.129genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS162.14.8e-50169371135345
                          GRAS 135 RpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlld 215
                                   R  +  sl++ +vg+     +e++  tg+rL++fAe+lgvpfef+++v+ +l+dl+  ++++++gEa+ +++++ +  + +
  evm.model.AsparagusV1_02.129 169 RLCPVESLKLSAVGP----AEEAVVPTGKRLSSFAENLGVPFEFRAVVVPDLKDLKETMFELSEGEAVGIHSQMDMNAMIA 245
                                   5567789********....99************************************************************ PP

                          GRAS 216 esvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                                   ++ sle+    v++++ +++P+v++vv+ ea+hns+sF  rf+eal y+sa fd++++ ++r +e+r+ +E  ++++ i++
  evm.model.AsparagusV1_02.129 246 RPESLEN----VMRVIGRIRPRVMTVVDVEAKHNSPSFIGRFTEALFYFSAWFDCFDSVMARGDENRMELEGSFFSQGIRS 322
                                   *******....********************************************************************** PP

                          GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                                   ++a+eg+er+ r+  ++ Wre ++++G+ +v++se+   qakl+l +++
  evm.model.AsparagusV1_02.129 323 IIAAEGEERVVRQVGVSVWREFFKRFGLVEVQVSEYSLYQAKLVLDRFE 371
                                   *********************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1000 aa     Download sequence    
MMLNPDQFSF TDYGSDVDCG SRGFVDGSVA KPAHGXXXXG DGGGAADHDL WSSYGFFPDS  60
STPPSSAPQC FQDLMAVDEA SFDAIANAMT EMSALLPPKE NTTVRTGDEL STEEVVRIAA  120
AHFVQLSSPE ERLPFGTSLS GLTTEEVKNV ELSTLLLAAA GNPVQRLSRL CPVESLKLSA  180
VGPAEEAVVP TGKRLSSFAE NLGVPFEFRA VVVPDLKDLK ETMFELSEGE AVGIHSQMDM  240
NAMIARPESL ENVMRVIGRI RPRVMTVVDV EAKHNSPSFI GRFTEALFYF SAWFDCFDSV  300
MARGDENRME LEGSFFSQGI RSIIAAEGEE RVVRQVGVSV WREFFKRFGL VEVQVSEYSL  360
YQAKLVLDRF ECGGSCTLLV LDLGFVRFGV FGEDVGERLD FEGVGSRNVR GLEPLQSLLL  420
YLQLPAAGLS PYNRSPAHPD PRPPKKSSPP PPLANPPTPS PPSPISGSPP PSKSQTPPAT  480
PSSPPPKESP PLVPSPPSPP PSNSSSGSPP LDPSPPSPPL PSPNTPTGDP TSPISPSGNG  540
NKSSSFSPNV TAGTGGGGNG GGHEVKTGVV VPIAVVASLL VLGLVGLAVW YFKKKRRRSG  600
GYAAGFVMPS PFASSQISES SPTARLAYHS SGTGSNGFMD SPDPGVGNSK QWFSYDELYK  660
ITNGFSDQNL LGEGGFGCVY KGCLPDGREV AVKQLKVGGS QGEREFRAEV EIIGRVHHRH  720
LVSLVGYCIA GNQRILVYDF VPNNTLHYHL HAEGRPVLDW ATRVKIAAGA ARGLAYLHED  780
CHPRIIHRDI KSSNILLDAN FEAQVSDFGL ARLAMDAVTH VTTRVMGTFG YLAPEYASSG  840
KLTEKSDVYS FGVVLLELIT GRKPVDTSQP VGDESLVEWA RPLLTHALET GDFNELPDPR  900
LEKNYDEKEM FRMIEAAAAC VRHSAAMRPR MGLVARALDG LSDIDLSNGM KPGNSELFSA  960
QSADIALFRR MAFGSQEYSS DLSNFSNFSR TSRQSQRDV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1593598KKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.15e-23GRAS family protein