PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1170

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 273aa MW: 31171.2 Da PI: 8.2352

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1170	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	92	114	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H + H evm.model.AsparagusV1_02.1170 92 SCSVCSRVYPTSRLLSIHVSEaH 114 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEADGEEKDI GFPFLIASRR RFRPDNPFFA AGNIERELLA KQVALDLTED EICQLQNMED 60 DYIVHCPMVG CGARLNCLEE FEDHYHARHT ASCSVCSRVY PTSRLLSIHV SEAHDSFFQA 120 KLARGFPMYE CLVEGCDMKL KSYKGRQQHL VDKHKFPTSF EFFKKAKPSK HHRQKTQRKQ 180 SDHLINTKES GMDVDEKTSK HQSQKKVQES KETAMEVEGE VDKLASAVSK LKTSDSTPSS 240 VSFGHRHARG FTFLPRAVRQ NVKQASQFDE KR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-106	C2H2 family protein