PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.811 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1006aa MW: 112328 Da PI: 4.8766 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.8 | 1.7e-10 | 31 | 74 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l evm.model.AsparagusV1_01.811 31 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 74 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1006 aa Download sequence |
MARISSLLVR KSAKQCKARG NEWLDLALKK TEWTREEDEK LLHLAKLMPT QWRTIAPIVG 60 RTPSQCLERY EKLLDAACAK DENYEANDDP RKLRPGEIDP NPESKPARPD PVDMDEDEKE 120 MLSEARARLA NTRGKKAKRK AREKQLEEAR RLASLQKRRE LKAAGIPTRQ RRRKRKGIDY 180 NAEIPFEKRP PPGFYDVSGE ERPVENPKFP TTIEELEGKR RVDIEAQLRK QDIAKNKIAQ 240 RQDAPSAILQ ANKLNDPEAV RKRSKLMLPA PQISDQELEE IAKMGYASDL ISGADELSEG 300 SGATRALLAN YSQTPRQGMT PMRTPQRTPA GKADAVMMEA ENLARLRESQ TPLLGGENPE 360 LHPSDFSGVT PRKREIQTPN PMATPLMSPG STGLTPRIGM TPSRDGNSFG ATPKSTPYRD 420 ELHINEDNEI HKQAELRRNL RSGLTSLPQP KNEYQIVIQP IPEENEEVEE KIEEDMSDKI 480 AREKALEQAR QEVLLRKRSK VLQRELPRPP AAALDLIRNM LMRKDEDKSS FVPPTLFEQA 540 DEMINKELLA LLEHDNAKYP LEEKSDKERK KGVKRAANGK SSMPVPEIED FEEDELKEAD 600 SLIREEVEFL QVAMGHENES LDDFVKAHDA CQEDLMYFPG RNTFGLASVA GSSEKLAALQ 660 NDFEIMKKRL DDEAKKATKL ENKIKLLTHG HQMRAGKLWS QIEATFKQMD TAATELECFQ 720 ALQKQEVVAA SYRVGSLMEE VNKQKGLERN LQQRYGDLIA EHDRVQKLLE EHRERLRLED 780 EITAKQRALE EEVAAKQRAL EEEVAAKNRA LEEEIVARSH TVDEEMKDVG ETDLSSSDPT 840 DADNADKVAN APDNLSKASN NEDMAPEGVG HSTESVATDA YVAETAHQVE NPHPQASAAS 900 NSSGLDEMMT IDSVQPIVDN STVSDSTAPT IANASDPTVI LRKSDVVASQ SSDADPIITE 960 VTVGDSSRQM DGPCLVSFGE NLTVNAELPN ESNTLASGSG EMESS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 176 | KRRELKAAGIPTRQRRRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |