PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NF-YC | ||||||||
Protein Properties | Length: 178aa MW: 20076.6 Da PI: 6.0162 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 169.5 | 3.9e-53 | 47 | 150 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksd 78 ql+ fw++q ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+file+t r w haeenkrrtl+k+d evm.model.AsparagusV1_01.516 47 QLQLFWADQhreIEQTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILEITHRGWAHAEENKRRTLQKND 127 89*****99999********************************************************************* PP NF-YC 79 iaaavtrtdifdflvdivprdel 101 iaaa+trt++fdflvdivpr+e evm.model.AsparagusV1_01.516 128 IAAAITRTEVFDFLVDIVPREEG 150 ********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MDPQGHGTPP PPMNPAAVQY PAGTPYLPYN HLYHQHQQHQ QQQQTQQLQL FWADQHREIE 60 QTTDFKNHNL PLARIKKIMK ADEDVRMIAA EAPVVFARAC EMFILEITHR GWAHAEENKR 120 RTLQKNDIAA AITRTEVFDF LVDIVPREEG KDEAGVGIGG PDVVAGGDPM GYFYVPQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 126 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 6e-65 | NF-YC family protein |