PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.3476

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HSF

Protein Properties

Length: 366aa MW: 42434.2 Da PI: 5.222

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.3476	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.6	1.1e-34	10	100	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 Fl k+y++++d++++ ++sws++++sfvv+d+ efa+++Lpk+Fkh+nf+SF+RQLn+YgF+k + e+ weF evm.model.AsparagusV1_01.3476 10 FLAKTYDMVDDPSTDAIVSWSASNDSFVVWDPLEFARDLLPKFFKHNNFSSFIRQLNTYGFRKKDPER---------WEF 80 9******************999***********************************99988.........* PP EESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 82 khksFkkgkkellekikrkk 101 ++++F +g+++ll++i+r+k evm.model.AsparagusV1_01.3476 81 HNDEFIRGQRHLLRNIHRRK 100 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEGSNPLPPF LAKTYDMVDD PSTDAIVSWS ASNDSFVVWD PLEFARDLLP KFFKHNNFSS 60 FIRQLNTYGF RKKDPERWEF HNDEFIRGQR HLLRNIHRRK PIHSHSLHHH GQGSLPLGDS 120 ERQELEDEIR RLQREKDILM AELQKHTQQQ HSMEKQMQAL EDRLLNIEVR QRNILANVSQ 180 FIQRPGFLSN LISSSDLHSK KRRLPENNLF NEDAFEKMES SLDSLENLFR EVSQVSDEDI 240 YCDGTNPSTV VLTEIHAPSS PISSPCLENI HSSPELEEST SYAESPKILV TRDKVSEIDV 300 DSEPSNVRTR VNDVFWEQFL TETPGSDERR EADGKRMEMG SFWLNRENVE HLTVKMGHLT 360 PDEKT*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEGSNPLPPF LAKTYDMVDD PSTDAIVSWS ASNDSFVVWD PLEFARDLLP KFFKHNNFSS  60
FIRQLNTYGF RKKDPERWEF HNDEFIRGQR HLLRNIHRRK PIHSHSLHHH GQGSLPLGDS  120
ERQELEDEIR RLQREKDILM AELQKHTQQQ HSMEKQMQAL EDRLLNIEVR QRNILANVSQ  180
FIQRPGFLSN LISSSDLHSK KRRLPENNLF NEDAFEKMES SLDSLENLFR EVSQVSDEDI  240
YCDGTNPSTV VLTEIHAPSS PISSPCLENI HSSPELEEST SYAESPKILV TRDKVSEIDV  300
DSEPSNVRTR VNDVFWEQFL TETPGSDERR EADGKRMEMG SFWLNRENVE HLTVKMGHLT  360
PDEKT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	8e-79	HSF family protein