PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3001
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 285aa    MW: 32339.6 Da    PI: 8.5809
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3001genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM180.25.2e-5651301128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdeel+++yL++kv +  + + ++i++vd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat+s
  evm.model.AsparagusV1_01.3001   5 LPPGFRFHPTDEELITYYLTRKVLDFGFVA-KAITDVDLNKCEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATDS 83 
                                    79*************************999.88***************988999************************** PP

                            NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    gyWk+tgkdke+++  g lvg+kktLvfy+grapkgekt+Wvmheyrl
  evm.model.AsparagusV1_01.3001  84 GYWKTTGKDKEIFH-CGVLVGMKKTLVFYRGRAPKGEKTNWVMHEYRL 130
                                    **************.9******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEESLPPGFR FHPTDEELIT YYLTRKVLDF GFVAKAITDV DLNKCEPWDL PGKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TDSGYWKTTG KDKEIFHCGV LVGMKKTLVF YRGRAPKGEK  120
TNWVMHEYRL QTKFPYKPSK DEWVVCRVFK KSSTGKKPLP NSSSLPISPL SSPCNAASVT  180
ELGELDASSI LNGIVNPSVS FNSMQTNESI ITSHNNITNR MDMNSNMNMN MNMYMNWMLG  240
SSLNSFVVGQ GDNHPHQMNS FHGSSSKGAD ELQQNEHEQM WRGF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.14e-98NAC family protein