PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.2742 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | Trihelix | ||||||||
Protein Properties | Length: 88aa MW: 9900.2 Da PI: 10.0442 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 27.8 | 6.8e-09 | 6 | 37 | 42 | 73 |
trihelix 42 gferspkqCkekwenlnkrykkikegekkrts 73 +rs++qCk++we+l +ykki+ +e ++++ evm.model.AsparagusV1_01.2742 6 NRKRSSNQCKKRWESLLSDYKKITIWEASNSA 37 568************************99632 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MVGSENRKRS SNQCKKRWES LLSDYKKITI WEASNSASAY GPYSSLKPGR RRKLHLPYSF 60 DQQVFCSLDV VIKAQEARIA SSATDID* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 1e-11 | Trihelix family protein |