PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2737
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 307aa    MW: 34411.4 Da    PI: 6.9974
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2737genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09149196455
                                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  evm.model.AsparagusV1_01.2737 149 SHSLAERVRRERISERMKYLQGLVPGC----NKITGKAGMLDEIINYVQSLQ 196
                                    8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MQDMMMHCLN PSVLERQRAH LQWQDAHNLN ACENFSSLHE QSEGLIDHCW PNLNASTNTP  60
SPATTMCNSS SSAKVGKEKS SKKRKADKSP VVSGDDEEEK RPKGDRENKV EKRKENKRED  120
SGTTGSKENN DKKQDYIHVR ARRGQATDSH SLAERVRRER ISERMKYLQG LVPGCNKITG  180
KAGMLDEIIN YVQSLQRQVE MNLSYNSSIG MESEIIDPSF LQFNVLQQAI TSCGYDMGVS  240
MNPTELALQR SISPPANEPP PFLDSNFNVP RSNPGWDNEL HNLYGSAFPF LSLQGNHLSG  300
NLKTEM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.16e-39bHLH family protein