PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2513
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 313aa    MW: 35900.5 Da    PI: 7.9051
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2513genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1738.7e-5471361128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknra 77 
                                    +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+++d++k+ePwdL+ k ++ +  ++ewyfFs++dkky+tg+r+nra
  evm.model.AsparagusV1_01.2513   7 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIRDIDLNKLEPWDLKdKcRIGTgPQNEWYFFSHKDKKYPTGTRTNRA 85 
                                    69****************************.9***************943444443456********************* PP

                            NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    t++g+Wkatg+dk+++ ++++ +g++ktLvfy+grap+g+ktdW+mheyrl
  evm.model.AsparagusV1_01.2513  86 TTAGFWKATGRDKAIHLSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 136
                                    *************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MNGQLTVPPG FRFHPTDEEL LYYYLRKKVA YEAIDLDVIR DIDLNKLEPW DLKDKCRIGT  60
GPQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI HLSNSKRIGM RKTLVFYTGR  120
APHGQKTDWI MHEYRLDEGC TDVQEDGWVV CRVFKKKNHQ RGIPPQSLLE EEDYHRLSHQ  180
QPTGSTSFDH KHANYQIPTP CDFSFHSSMH LPQLLSAESS VHQNFTSIPP SLSLNTLDLE  240
CSHNLMKLTS PSDWSILDKL LASHQNLDHI FHNNKCSPPT GQASMDIGSG GQKFPFQYLG  300
CDAHDQMFKF SK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-103NAC family protein