PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2131

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 389aa MW: 43482.6 Da PI: 7.7118

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2131	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.5	9.1e-35	39	189	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee...............vikev.diykvePwdLpkkvkaeekewyfFskr 64 lp+G++F+Ptd+el+ e+L++kv++ +++ ++ +i+ +i++++P++Lp v+ + + +fF++ evm.model.AsparagusV1_01.2131 39 LPAGVKFDPTDQELI-EHLEAKVAEGSTSGSDsnsklshplidefipTIQGEdGICYTHPERLP-GVTRDGLSKHFFHRP 116 799**********.99*9999554445566777777777665777647******.555666799** PP NAM 65 dkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +k+y+tg+rk+r+ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l evm.model.AsparagusV1_01.2131 117 SKAYTTGTRKRRKiqtecdlqRGETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 189 ********75555554433788********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MSSTTDLIDA KLEEHRMIIS KQCPSCGHKL DQKPDWVGLP AGVKFDPTDQ ELIEHLEAKV 60 AEGSTSGSDS NSKLSHPLID EFIPTIQGED GICYTHPERL PGVTRDGLSK HFFHRPSKAY 120 TTGTRKRRKI QTECDLQRGE TRWHKTGKTR PVMVNGKQKG CKKILVLYTN FGKHRKPEKT 180 NWVMHQYHLG ELEEEKEGEL VVSKIFYQTQ PRQCSWSADK GSAGSCSSKE VLGQREVEVG 240 GGGDYGGIEN FSFGPFRKSF DEVGMGEVST KTRETHEEHG HHEHGHLRAT SHHQLSQEQQ 300 QNRQAASAAF HNISRPTNPI SSIISPTPIH QSSVVLDDAF HVSRILMQQT DKFQPSSEQQ 360 QQPAKKLVER SSAGLEELIM GCTSSGNRG

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MSSTTDLIDA KLEEHRMIIS KQCPSCGHKL DQKPDWVGLP AGVKFDPTDQ ELIEHLEAKV  60
AEGSTSGSDS NSKLSHPLID EFIPTIQGED GICYTHPERL PGVTRDGLSK HFFHRPSKAY  120
TTGTRKRRKI QTECDLQRGE TRWHKTGKTR PVMVNGKQKG CKKILVLYTN FGKHRKPEKT  180
NWVMHQYHLG ELEEEKEGEL VVSKIFYQTQ PRQCSWSADK GSAGSCSSKE VLGQREVEVG  240
GGGDYGGIEN FSFGPFRKSF DEVGMGEVST KTRETHEEHG HHEHGHLRAT SHHQLSQEQQ  300
QNRQAASAAF HNISRPTNPI SSIISPTPIH QSSVVLDDAF HVSRILMQQT DKFQPSSEQQ  360
QQPAKKLVER SSAGLEELIM GCTSSGNRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-120	NAC family protein