PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.1989 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | FAR1 | ||||||||
Protein Properties | Length: 260aa MW: 29433.8 Da PI: 6.5278 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 77 | 3.7e-24 | 89 | 177 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +fYneYA++ GFs+r+++ ++g +r fvC keg r+ +k++ + +r++r etrt+C a + +++ + +gk+ ++ evm.model.AsparagusV1_01.1989 89 DFYNEYARSEGFSIRREAYAAD-KQGVLSSRIFVCCKEGLRKADKRD-DLTRNPRGETRTNCGAIMGINLVRrTGKYSIY 166 6***************987666.8899*****************999.9*********************999******* PP FAR1 80 kleleHnHela 90 ++++eHnH+l evm.model.AsparagusV1_01.1989 167 RFSEEHNHPLI 177 *********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGGLKVEDEL DGEIAEEEGL GSQGRERLVG GDGRSAKRIQ QIEGQSWGHK RQSIMEELVE 60 ESNDSLERSK EDLKPKFFRE FNSEIAAYDF YNEYARSEGF SIRREAYAAD KQGVLSSRIF 120 VCCKEGLRKA DKRDDLTRNP RGETRTNCGA IMGINLVRRT GKYSIYRFSE EHNHPLINQE 180 SIHFMPSHRK ITSSDEAFLD LTANSGHSSN SAFELMGQQA GGRESLGFIM VDQKNYLGTI 240 RQKKMKFGEA GYLIEYFSK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-25 | FAR1 family protein |