PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1948
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family BES1
Protein Properties Length: 289aa    MW: 31505.3 Da    PI: 9.8396
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1948genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822209.31.1e-6431482149
                         DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaea 81 
                                    +++r+ptwkErEnnk+RERrRRaiaakiyaGLR +Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp e +++
  evm.model.AsparagusV1_01.1948   3 SGTRMPTWKERENNKQRERRRRAIAAKIYAGLRTYGNYKLPKHCDNNEVLKALCDEAGWTVEPDGTTYRKGCKPAEPMDV 82 
                                    689***************************************************************************** PP

                         DUF822  82 agssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149
                                    ag+sas sp+ss+q        +sp +sy++s +sss  sp+s+ +++++ +       +sl+p+l++ls++sss
  evm.model.AsparagusV1_01.1948  83 AGTSASPSPCSSYQ--------PSPYASYNPSAASSSLHSPASYVKNTNN-PingvpdaNSLIPWLKNLSSASSS 148
                                    **************........9999999999999999999998777554.35788888**********997766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MMSGTRMPTW KERENNKQRE RRRRAIAAKI YAGLRTYGNY KLPKHCDNNE VLKALCDEAG  60
WTVEPDGTTY RKGCKPAEPM DVAGTSASPS PCSSYQPSPY ASYNPSAASS SLHSPASYVK  120
NTNNPINGVP DANSLIPWLK NLSSASSSSA SSKPPHHNNL YIHTGSISAP VTPPLSSPTA  180
RSPRMKTEPS WHPETHYTFL PSSTPSSPGR QILPEPVWLA GLQLKWGHRS PTFSLVSPNQ  240
FGAFSREGSR VKGSSEMWTT GTEWDVFAPV MPAGTPPRRC SYDGLCVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-57BES1 family protein