PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1267
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 331aa    MW: 37290.7 Da    PI: 7.3738
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1267genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.64.3e-52111391128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknra 77 
                                    +ppGfrFhPt+eel+++yL+kk+ g++++l ++i++vd++k+ePwd++ k+k     +++wyfFs++dkky+tg+r+nra
  evm.model.AsparagusV1_01.1267  11 VPPGFRFHPTEEELLNYYLRKKLVGQNIDL-DFIRDVDLNKLEPWDIQDKCKIgstPQNDWYFFSHKDKKYPTGTRTNRA 89 
                                    69****************************.99**************954444122455********************* PP

                            NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    t++g+Wkatg+dk +++ +++ +g++ktLvfykgrap+g+k+dW+mheyrl
  evm.model.AsparagusV1_01.1267  90 TAAGFWKATGRDKVIYT-GRKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139
                                    *****************.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MSITVNGQSC VPPGFRFHPT EEELLNYYLR KKLVGQNIDL DFIRDVDLNK LEPWDIQDKC  60
KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTGRKR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD ESNSLSHVQV ANTMGEANNQ EDGWVVCRVF KKKNLLHKSS  180
DSPNNSTPSI AVDAKTHFLL HSQSDGALDQ ILQYMGRSCK QERFMKLPAL ESPTIPPMTE  240
EFSNKSSYPS EDIRSVVSTD AGSHVETGMT DWTALDRLVA SHLNGQSDAS KQLYSCFDXX  300
XXNNNNDDGD LWSLASSASD PISHVSHTSI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-110NAC family protein