PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.107 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | FAR1 | ||||||||
Protein Properties | Length: 231aa MW: 25494.2 Da PI: 5.8293 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 24.6 | 8.2e-08 | 137 | 197 | 2 | 66 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkakl 66 +Y+++Ake GF v k++s k ++g + + ++Csk gk++ + ++ +tr++t+++ a+l evm.model.AsparagusV1_01.107 137 YYSRFAKEKGFVVAKRSSGKG-KDGVVRHVILQCSKGGKARARGSN---PIKTRPQTKVDSPAHL 197 8***************99997.8999****************9988...7777777777777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MASASILTKE DMASASISSP SNPPHSPESS HHDLSNPSNI VLSSQSHRDE SLVRGNNDLG 60 QSHVQGDNNP EKAMFDLMLW SGDHGEEEEV LSGFSKEGTD EINTNEDGNE AMKNCEERVE 120 EPDVGMEFNT PNEAYLYYSR FAKEKGFVVA KRSSGKGKDG VVRHVILQCS KGGKARARGS 180 NPIKTRPQTK VDSPAHLKEM EFYLPNIAQI YMTRNKFDEK EDHGLKGRKV * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 2e-06 | FAR1 family protein |