PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028557319.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 470aa MW: 54341.6 Da PI: 6.7713

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028557319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.1	1.5e-31	95	148	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ XP_028557319.1 95 PRLRWTPELHLSFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 148 8****************************************************7 PP
2	Myb_DNA-binding	50.1	6.2e-16	96	147	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ XP_028557319.1 96 RLRWTPELHLSFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 147 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MDEEKGKDVV EIYDEETLEL RLPTKPLDLN EEVNEEKEKE EEEDKGSSSE VMGESDHGSS 60 NGEGGRGSSE SKGDEEGRRE QLGPTVRQYV RSKMPRLRWT PELHLSFVHA VERLGGQERA 120 TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK LDDSGQERSN ISSALSPFDA HMRRDRFHEM 180 FYQRPGSYQP FRMERGGFFR AGNIHEDDWF YKVLQKSQSQ QPISDFKNTS FRNQEWVFNQ 240 HIAARANTIK EQDHANGLLH GMIFKKEGKT AASHLFDVRD VLTVNEISRK PYKLQEERQW 300 QLGRSTYHNE NSISSSMSNS NFGKRVNNYI INQSSLRDPF AFKSRQETQN FQSPIHQAEL 360 RKQEVLEREE PLRDTKRTRL IKEENEKMPD LQLSLSTSSM ENGFDAKRSS ETGVDSELSL 420 SLTPTISTEN KKIFKMQDKI MNSEIDFFKL SSSNKSNLRI STLDLTMSIN

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MDEEKGKDVV EIYDEETLEL RLPTKPLDLN EEVNEEKEKE EEEDKGSSSE VMGESDHGSS  60
NGEGGRGSSE SKGDEEGRRE QLGPTVRQYV RSKMPRLRWT PELHLSFVHA VERLGGQERA  120
TPKLVLQMMN VRGLSIAHVK SHLQMYRSKK LDDSGQERSN ISSALSPFDA HMRRDRFHEM  180
FYQRPGSYQP FRMERGGFFR AGNIHEDDWF YKVLQKSQSQ QPISDFKNTS FRNQEWVFNQ  240
HIAARANTIK EQDHANGLLH GMIFKKEGKT AASHLFDVRD VLTVNEISRK PYKLQEERQW  300
QLGRSTYHNE NSISSSMSNS NFGKRVNNYI INQSSLRDPF AFKSRQETQN FQSPIHQAEL  360
RKQEVLEREE PLRDTKRTRL IKEENEKMPD LQLSLSTSSM ENGFDAKRSS ETGVDSELSL  420
SLTPTISTEN KKIFKMQDKI MNSEIDFFKL SSSNKSNLRI STLDLTMSIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-36	G2-like family protein