PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028556708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Dof | ||||||||
Protein Properties | Length: 219aa MW: 23567.9 Da PI: 6.4967 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 106.6 | 1.3e-33 | 2 | 54 | 8 | 60 |
zf-Dof 8 cprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 cprC+stntkfCyynnys sqPr+fC+ Crr+Wt+GG+lrn+PvGggr+++++ XP_028556708.1 2 CPRCESTNTKFCYYNNYSRSQPRHFCRVCRRHWTEGGTLRNIPVGGGRKNKRR 54 **********************************************9877665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MCPRCESTNT KFCYYNNYSR SQPRHFCRVC RRHWTEGGTL RNIPVGGGRK NKRRKITPTA 60 TSLAAAAGGN PIAPVVGEMK DPIFPDILRQ VLLHQPPPPP PPLPLESPCM DTLEGLFGAS 120 LPKTFLTFME DFSGVSSGLA LSAGEIPFMG AASTSHQNLS GVQDVSGGCG DGFLGMMDAS 180 AASIWVKKET VFPASYWDFW DGGAEDLNIG AVAETMLPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 3e-28 | Dof family protein |