PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028556064.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 306aa MW: 34163.3 Da PI: 7.4056

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028556064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.4e-33	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLH rFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_028556064.1 48 RQRLRWTHELHGRFVDAVAQLGGPDRATPKGVLKVMSVPGLTIYHVKSHLQKYRL 102 58****************************************************8 PP
2	Myb_DNA-binding	54.6	2.5e-17	50	101	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++ ++vdav+qlGg+ t+k + + m g+t +++ks++qky+ XP_028556064.1 50 RLRWTHELHGRFVDAVAQLGGPdraTPKGVLKVMSvPGLTIYHVKSHLQKYR 101 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MHQSNPIPSK TSAFNSAVYR DQQLELSSST MDSNHSVNSS TNPSLASRQR LRWTHELHGR 60 FVDAVAQLGG PDRATPKGVL KVMSVPGLTI YHVKSHLQKY RLAKYIPESS TDGSKAEKKE 120 PGELISSLDN SSGLQITEAL KLQMDVQKRL HEQLEVQRQL KLRIDAQGKY LKKIIEEQQR 180 LTGVLAETPR INSPTPLSST DFYPNSEKTD PSTPAAICDS LHRDACNLFK GIPSVDSESF 240 RHDRLFRRQC CNGGDIGGIV EVNLKLGHHV FEPSSPPEFQ QQCFSMFPHN RGHFESSGTS 300 IDDDNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-86	G2-like family protein