PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028555597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 139aa MW: 15091.1 Da PI: 5.2335 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.9 | 5.6e-06 | 1 | 18 | 38 | 55 |
STCHHHHHHHHHHHHHHH CS HLH 38 lsKaeiLekAveYIksLq 55 +sK ++L+ A++YIk+Lq XP_028555597.1 1 MSKESTLTDAIDYIKHLQ 18 59***************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MSKESTLTDA IDYIKHLQKQ IVDLQIELST VGTEGGEKQG SSSSTATKAS QDTVRFQGML 60 ELSPMGQNKF YLKVTSEKRN NGFTKLLEDI SQLGLEVNEV SSVSFSGISH GVLCLESKDE 120 KEIHIADVKK ILSTAIGAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 6e-09 | bHLH family protein |