PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028553743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 313aa MW: 36689.1 Da PI: 6.9957 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.9 | 5.5e-55 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+eP+dL++ k+ e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_028553743.1 7 VPPGFRFHPTDEELVNYYLRKKIASRRIDL-NVIKDVDLYKIEPSDLQEicKIGDeEQHDWYFFSHKDKKYPTGTRTNRATTTGFWKATGRDKPI 100 69****************************.99**************9534444424459*********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k++l+g++ktLvfykgrap+g+k+dW+mheyrle XP_028553743.1 101 YS-KHKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 **.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MDTAAHVPPG FRFHPTDEEL VNYYLRKKIA SRRIDLNVIK DVDLYKIEPS DLQEICKIGD 60 EEQHDWYFFS HKDKKYPTGT RTNRATTTGF WKATGRDKPI YSKHKLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLESDEN GTQQDEGWVV CRAFKKRALS IRKGNEFDHD ESTCWYNENM 180 SLMQSTLSQW NMDYNHLPYS FKEQMFQSFH PYDPHLHLPQ LHSPKFHVNV ALPLQKQVNH 240 DCQIERVSFH NSTPKNSQTM DDQVIDWRIL DKFVASQLSQ EGISKDLNDT NAQDNLPIPG 300 KEEGDHSSVM HNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-103 | NAC family protein |