PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028552321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | MYB_related | ||||||||
Protein Properties | Length: 118aa MW: 13477.4 Da PI: 4.9968 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.5 | 7.3e-09 | 20 | 64 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT e +l+ +a + + + +W+++a+ +g g++++++k ++ XP_028552321.1 20 TWTSEQNKLFERALAVYDEEtpeRWEKVASAVG-GKSAEEVKIHYE 64 7*****************99*************.**********95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
LLLLLLLLEE LMESRESGST WTSEQNKLFE RALAVYDEET PERWEKVASA VGGKSAEEVK 60 IHYELLVEDL KHIESGSVPL PNYKFSGSGR KSTDKEKRFF VSNSSAFSLL FLLLRWPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 6e-35 | MYB_related family protein |