PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028551992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 29138.2 Da PI: 7.3446 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.6e-11 | 84 | 131 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +Kl+K++iL A++ + +L XP_028551992.1 84 SKACREKMRRDRLNDKFLELGSILEPG---KPPKLDKVAILCDATRMVTQL 131 5778**********************9...99*************999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MASPENPNWL LDCPLIDDLS APPANGFIWA PQEFNHQSKV RPPFSTHEGY VSMGANDPFV 60 ETETFKEQGS QKRARSESSS QAGSKACREK MRRDRLNDKF LELGSILEPG KPPKLDKVAI 120 LCDATRMVTQ LRADAQKLND LNQTLQDKIK ELKLRLFSST WNPPPTEWIK LNVDASLREN 180 YAAGVGGVLR DCKGRFLFAF GFKRMHWDCS TLEVEAVISF NKVIQEWMFE AKGIIIEGDN 240 YNVLKFIQNT IKEGVQGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 8e-45 | bHLH family protein |