PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028550531.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

BES1

Protein Properties

Length: 655aa MW: 73661 Da PI: 5.6657

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028550531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	132.6	4.2e-41	59	147	2	92
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 g++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+p ++++g+ a+asp + XP_028550531.1 59 GGRRSRPKEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSSPS--SSQVGKPAEASPLT 147 7899*****************************************************************999888..56666666666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG 60 RRSRPKEEKE RTKLRERHRR AITARILAGL RRHGNYNLRV RADINDVIAA LAREAGWVVL 120 PDGTTFPSRS SPSSSQVGKP AEASPLTVAV AAQTTPHLKG LSPAGGQISS GDNRQCRLKG 180 VYTLPSAYDG QYRQGVIVGG ERCNENFPLV VSCKEIANEK QVIDLPQRLP ERDFAGTPYV 240 PVHVMLPVRI LKSINIDGVT VDCWWGIVEA HAPQEYNWHG YRRLFQIIRE LKLKLQVVMS 300 FHECGGNIGD DVCIPLPHWV AEIGRGNPDI FFTDREGRRN SECLSIGIDK ERVLRGRTAL 360 EVYFDYMRSF RVEFDEFFED GIISAVEVGL GPCGELRYPS YSVKNGWRYP GIGEFQCYDQ 420 YLIKSLRKAA EARGHSFWAR GPENAGSYNS RPQETAFFCD GGDYDGYYGR FFLGWYSQLL 480 VDHADRVLSL AKLAFEGTCI VAKISGVYWW YKTASHAAEL TAGFYNPCNR DGYASIASML 540 KRHFVTLNLC SELRTSNQQA GFSEALADPE GLIWQVLNAA WDVSIPVASV NSFPCYDRDS 600 YNKILENAKP LDDPDGRHLS SFTYLRLSPV LMEGCNFSEF ERFVKRMHGE AVLDL

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG  60
RRSRPKEEKE RTKLRERHRR AITARILAGL RRHGNYNLRV RADINDVIAA LAREAGWVVL  120
PDGTTFPSRS SPSSSQVGKP AEASPLTVAV AAQTTPHLKG LSPAGGQISS GDNRQCRLKG  180
VYTLPSAYDG QYRQGVIVGG ERCNENFPLV VSCKEIANEK QVIDLPQRLP ERDFAGTPYV  240
PVHVMLPVRI LKSINIDGVT VDCWWGIVEA HAPQEYNWHG YRRLFQIIRE LKLKLQVVMS  300
FHECGGNIGD DVCIPLPHWV AEIGRGNPDI FFTDREGRRN SECLSIGIDK ERVLRGRTAL  360
EVYFDYMRSF RVEFDEFFED GIISAVEVGL GPCGELRYPS YSVKNGWRYP GIGEFQCYDQ  420
YLIKSLRKAA EARGHSFWAR GPENAGSYNS RPQETAFFCD GGDYDGYYGR FFLGWYSQLL  480
VDHADRVLSL AKLAFEGTCI VAKISGVYWW YKTASHAAEL TAGFYNPCNR DGYASIASML  540
KRHFVTLNLC SELRTSNQQA GFSEALADPE GLIWQVLNAA WDVSIPVASV NSFPCYDRDS  600
YNKILENAKP LDDPDGRHLS SFTYLRLSPV LMEGCNFSEF ERFVKRMHGE AVLDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein