PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028550530.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

BES1

Protein Properties

Length: 674aa MW: 75746.5 Da PI: 5.5645

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028550530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	132.6	4.4e-41	59	147	2	92
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 g++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+p ++++g+ a+asp + XP_028550530.1 59 GGRRSRPKEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSSPS--SSQVGKPAEASPLT 147 7899*****************************************************************999888..56666666666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG 60 RRSRPKEEKE RTKLRERHRR AITARILAGL RRHGNYNLRV RADINDVIAA LAREAGWVVL 120 PDGTTFPSRS SPSSSQVGKP AEASPLTVAV AAQTTPHLKG LSPAGGQISS GDNRQCRLKG 180 VYTLPSAYDG QYRQGVIVGG ERCNENFPLV VSCKEIANEK QVIDLPQRLP ERDFAGTPYV 240 PVHVMLPLGV INTKCELVDL EGLMKQVRIL KSINIDGVTV DCWWGIVEAH APQEYNWHGY 300 RRLFQIIREL KLKLQVVMSF HECGGNIGDD VCIPLPHWVA EIGRGNPDIF FTDREGRRNS 360 ECLSIGIDKE RVLRGRTALE VYFDYMRSFR VEFDEFFEDG IISAVEVGLG PCGELRYPSY 420 SVKNGWRYPG IGEFQCYDQY LIKSLRKAAE ARGHSFWARG PENAGSYNSR PQETAFFCDG 480 GDYDGYYGRF FLGWYSQLLV DHADRVLSLA KLAFEGTCIV AKISGVYWWY KTASHAAELT 540 AGFYNPCNRD GYASIASMLK RHFVTLNLCS ELRTSNQQAG FSEALADPEG LIWQVLNAAW 600 DVSIPVASVN SFPCYDRDSY NKILENAKPL DDPDGRHLSS FTYLRLSPVL MEGCNFSEFE 660 RFVKRMHGEA VLDL

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG  60
RRSRPKEEKE RTKLRERHRR AITARILAGL RRHGNYNLRV RADINDVIAA LAREAGWVVL  120
PDGTTFPSRS SPSSSQVGKP AEASPLTVAV AAQTTPHLKG LSPAGGQISS GDNRQCRLKG  180
VYTLPSAYDG QYRQGVIVGG ERCNENFPLV VSCKEIANEK QVIDLPQRLP ERDFAGTPYV  240
PVHVMLPLGV INTKCELVDL EGLMKQVRIL KSINIDGVTV DCWWGIVEAH APQEYNWHGY  300
RRLFQIIREL KLKLQVVMSF HECGGNIGDD VCIPLPHWVA EIGRGNPDIF FTDREGRRNS  360
ECLSIGIDKE RVLRGRTALE VYFDYMRSFR VEFDEFFEDG IISAVEVGLG PCGELRYPSY  420
SVKNGWRYPG IGEFQCYDQY LIKSLRKAAE ARGHSFWARG PENAGSYNSR PQETAFFCDG  480
GDYDGYYGRF FLGWYSQLLV DHADRVLSLA KLAFEGTCIV AKISGVYWWY KTASHAAELT  540
AGFYNPCNRD GYASIASMLK RHFVTLNLCS ELRTSNQQAG FSEALADPEG LIWQVLNAAW  600
DVSIPVASVN SFPCYDRDSY NKILENAKPL DDPDGRHLSS FTYLRLSPVL MEGCNFSEFE  660
RFVKRMHGEA VLDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein