PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550064.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 271aa    MW: 29423.5 Da    PI: 8.7916
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91.1e-3849107462
          zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       lkcprC+s+ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+ss
  XP_028550064.1  49 PPLKCPRCESQNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKPKRSS 107
                     5789***************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQDFQSITGQ STGRIFGGVT DGTGGGWDNR RLRAYPSATM APSPLHPPPP LKCPRCESQN  60
TKFCYYNNYN LSQPRHFCKS CRRYWTKGGV LRNVPVGGGC RKPKRSSNSK SRRSSASRSS  120
SDSSGRNPAD ASAALPDSVI FPNSSSSNPN PPNPSFDQPF AAAPDRAAEI FPDGAGTSFS  180
NLMAVTSSQS IHGFNFVNPP LLRHPDPHQK LEDITSQDII HQVVPGRANN SAIDWPPAMD  240
TSLYDLAGAT DPTAYWSQNH WVDGDPSLYL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.13e-27Dof family protein