PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028550016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19729.3 Da PI: 9.8888 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.00029 | 10 | 35 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 + +E+ RR +++ +L l+P++ XP_028550016.1 10 RKTVEKLRRMQMKALCLKLANLIPQD 35 5789********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MKGGEGKMDR KTVEKLRRMQ MKALCLKLAN LIPQDYLSKV FIQLFIHSVH QLVLSIFPLT 60 HTHSLDLYPP NNLLRCSDIS SICREGEILE FKFPVVEVRH QDQNLEVLLI SSLKKRIALH 120 EVIRIVEDGG ADVVNASFSI VGNKIIHTIH CQAISSRIGL DASKVSKRLL QLIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 4e-14 | bHLH family protein |