PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | TCP | ||||||||
Protein Properties | Length: 178aa MW: 20027 Da PI: 10.5098 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 137.3 | 1.3e-42 | 2 | 143 | 4 | 134 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......... 88 +kdrhski+T +g+RdRR+ ls+++a++fFdLqd LGfdk+skt++WLl ++k aikel+g s+ a + +++++ +s+ ++s+g XP_028548590.1 2 RKDRHSKIYTTQGPRDRRMKLSLDVARKFFDLQDLLGFDKASKTVQWLLSMSKVAIKELVGAASKCAVVSsSEGEEDNSTVSDSKGkstsailvn 96 8*************************************************************777772223222222222222222456799998 PP TCP 89 .kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134 ++++++k++ ++++ + ++a+esr+karararert ek++++ XP_028548590.1 97 eLESNAKPKGRILKSRSMVQPKVARESREKARARARERTLEKKMMRC 143 7444444455555555555699999*****************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MRKDRHSKIY TTQGPRDRRM KLSLDVARKF FDLQDLLGFD KASKTVQWLL SMSKVAIKEL 60 VGAASKCAVV SSSEGEEDNS TVSDSKGKST SAILVNELES NAKPKGRILK SRSMVQPKVA 120 RESREKARAR ARERTLEKKM MRCGREEDGS RGNYQQANVF DWMISSLCCL MTNSKDVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 2e-27 | TCP family protein |