PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028548189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | CAMTA | ||||||||
Protein Properties | Length: 772aa MW: 86141.9 Da PI: 6.1112 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 36.3 | 1e-11 | 34 | 70 | 74 | 110 |
CG-1 74 KvggvevlycyYahseenptfqrrcywlLeeelekiv 110 K+g+ e +++yYa++e++p+f rrcywlL++++++ XP_028548189.1 34 KIGNEERIHVYYARGEDDPNFYRRCYWLLDNNHSSHQ 70 99*****************************987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 772 aa Download sequence |
MKGTTSSWGC PLSSPMPCHL PITYELSVPA ISPKIGNEER IHVYYARGED DPNFYRRCYW 60 LLDNNHSSHQ LPSHVANVFI SWKLEHIVLV HYRQTLENVP ALVEYKEPFY LAGMMSDSSP 120 LTPVNSISGS MQSDSSGSAA MSEEINSRED QAIFTGSGIF LSKKETGLHI KELSLHDINN 180 LGWAELALAS EYIEPCMGKA DGALDSSDSV QFKAISSIHD QGGTEYLETP DDQGLPSVLL 240 NTSNLKMMSQ IVSDGPKMFD DDIFNNKNGF EQWDSLKKDS FGTLEAPLIS NGNGSNLFRA 300 MDQSSVLQQI FTINEVSPEW GYSTVETKVV VIGNFAASHK HLESSSIYCV FGELCVGMQM 360 VQSGVYRCIA LPQMPGKVDA FLSLDGQTPI SQVITFHYRH VPAVQLNDGV TSKDANGEEK 420 FRDVMAQKRL AHLLFSTSDS MPLFSSKMLP KAIKEAQRVA QITSPYIEND WKELLKLDCK 480 NEITFYQACE DLLELVFKNK LQEWLMKKIA EGCKITTRDS QGQGVIHLCT ILDYTWAVSL 540 YSLSGFSLDF RDAYGWTALH WAAHLGREKM VATLIYAGAN PSLVTDPTPE NPGGLTAADL 600 ASKGGHDGLA AYLAEKGLTA HFEAMSLSGN VPSSVLRVSK DQVNLEDLHS EMLSEQEVCL 660 KESLEAYRNA ADAADRIQAA FRERALKLQT ESVQLANPQM EASQIVAALR IQHAYRNYNR 720 RRLMKAAARI QSHFRTWRIR KDFLNMRRQV IKIQKNQNIL KAMNIQAEVF IV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16940.1 | 1e-155 | CAMTA family protein |