PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | BES1 | ||||||||
Protein Properties | Length: 172aa MW: 19745.7 Da PI: 5.431 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 92.3 | 1.1e-28 | 59 | 162 | 2 | 107 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 g++r+++ +E+E++k+ ER+RRai+a+i+aGLR++ ny+l++raD+n+V++AL+reA + +G + + s ++ e s++ + ss ++ XP_028547871.1 59 GGRRSRPKEEKERTKLWERHRRAITARILAGLRRHNNYNLRVRADINDVIAALAREAVDGEKSNGHEWNRRSTRN--GEGYLLSERDPVFSSDHE 151 7899*****************************************************988899999998877777..666666666666666665 PP DUF822 97 slkssalaspv 107 ++ s++ a p XP_028547871.1 152 KIPSKYRAIPS 162 66655554444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG 60 RRSRPKEEKE RTKLWERHRR AITARILAGL RRHNNYNLRV RADINDVIAA LAREAVDGEK 120 SNGHEWNRRS TRNGEGYLLS ERDPVFSSDH EKIPSKYRAI PSKYTEKISS ST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 5e-27 | BES1 family protein |