PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028547753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 167aa MW: 19137.9 Da PI: 10.325 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 94.5 | 8.5e-30 | 22 | 75 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rW++eLH+rFv+av++LGG+ kAtPk+il lm+v+gL ++hvkSHLQ+YR+ XP_028547753.1 22 PRIRWSNELHNRFVRAVDSLGGQTKATPKRILLLMGVNGLNISHVKSHLQMYRS 75 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 44.3 | 4.1e-14 | 25 | 74 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW+ e++ ++v+av lGg t+k+I mg +g+ ++ks++q+y+ XP_028547753.1 25 RWSNELHNRFVRAVDSLGGQtkaTPKRILLLMGvNGLNISHVKSHLQMYR 74 9***********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 167 aa Download sequence |
MMMMMEVSEK RRVRQYNRSE APRIRWSNEL HNRFVRAVDS LGGQTKATPK RILLLMGVNG 60 LNISHVKSHL QMYRSMSNSH SDLSNFQFSK GHCLQNISDQ CNHNFLEDSW KKSTSNSKIY 120 SSASNGMLMD EAISKKGDRD QGSKQKKVSC FFLLYSNQLC VACASFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38300.1 | 6e-25 | G2-like family protein |