PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547581.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ARR-B | ||||||||
Protein Properties | Length: 588aa MW: 66774.2 Da PI: 6.7345 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 84.8 | 8.8e-27 | 349 | 400 | 4 | 56 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 ++WtpeLH+rFv+a+eqL G+++A+P++ilelmkv+gLt+++v+SHLQk+R++ XP_028547581.1 349 VDWTPELHRRFVKAIEQL-GIDQAIPSKILELMKVEGLTRHNVASHLQKFRMH 400 78****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 40.9 | 4.6e-13 | 350 | 398 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+a++qlG + +++I + m +g+t+ ++ s++qk++ XP_028547581.1 350 DWTPELHRRFVKAIEQLGIDqaIPSKILELMKvEGLTRHNVASHLQKFR 398 6**********************************************97 PP | |||||||
3 | Response_reg | 22.8 | 4.6e-09 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l++d ++ + + le +y v + + e+a+e + k++++++ ++ ++G++ +k ++ + ++p iv++ +++ +++ +G XP_028547581.1 20 ILLCDQDRESAADTKMKLEAMDY-TVYSYCKEEDAMEAVlrKAENYHIAIVE--VAAINGHASFKFLEMVK-DIPTIVISEVHCLNTVMKCIALG 110 788888999999999999999**.8888888888888884555558888876..67899*99999998888.9*******9999*********** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++e+l++ XP_028547581.1 111 AAEFLQKPLSEEKLRN 126 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence |
MPCSADDLAL WKDFPKGLGI LLCDQDRESA ADTKMKLEAM DYTVYSYCKE EDAMEAVLRK 60 AENYHIAIVE VAAINGHASF KFLEMVKDIP TIVISEVHCL NTVMKCIALG AAEFLQKPLS 120 EEKLRNIWQH VVHKAFNAGG NAISTSLKPI KDAVATVLQI QSNSNELKIE IPSQLFDMEQ 180 EHEVIYVKEK ENDKFSAPST PQQIKGERLN EAETFLDQPD CSEKDCAIED KELSETPKCI 240 LSETKFVDNA CNNITVVGNS DEIVPCKQGT ATAEEELNSA EGSKADECNS AKEISLQFLF 300 TENVENDDSD SEKQTKKKSF VQSNSCLNRI RGSRRKMKVR SLRTRPKSVD WTPELHRRFV 360 KAIEQLGIDQ AIPSKILELM KVEGLTRHNV ASHLQKFRMH KRHILPKEDD RRWQVHTDPT 420 QRGYMQKPIM AFPPYHSNYI IPPSQPYPIW PHQAYHVPNV QMWRHSGLPT WHPPPENWQT 480 KIYPEIHADA WGCPVLPHYS YGYGQFYMPP QGPAISNSGQ DASGDRILKS SYDHCPAEEV 540 IDKVVKEAMK KPWLPLPLGL KPPSTEKILA ELHNKGIHTI PPLPRRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-116 | ARR-B family protein |