PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028127402.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | CPP | ||||||||
Protein Properties | Length: 457aa MW: 50887.7 Da PI: 8.3296 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 44.6 | 2.9e-14 | 71 | 110 | 2 | 42 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 e+k+C+Ck+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ XP_028127402.1 71 EQKRCKCKQSRCLKLYCECFASGTYCNG-CSCINCQNNVEN 110 79**************************.********9875 PP | |||||||
2 | TCR | 46.2 | 9.1e-15 | 156 | 193 | 2 | 39 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kgC+Ckks Clk+YCeCf+a+ Cse+CkC +CkN XP_028127402.1 156 KHKGCHCKKSGCLKRYCECFQAKILCSENCKCVGCKNF 193 579**********************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 457 aa Download sequence |
MEREAEKPGF PPKKLARQLD FANQNGLSLK VAPLEKSKSQ RKSKTELNLP PCRSPHSPLP 60 EMELIDGATK EQKRCKCKQS RCLKLYCECF ASGTYCNGCS CINCQNNVEN EAAREIAMES 120 TLERNPNAFK PKIIANSPHR TNDNEDEAKS TLPVVKHKGC HCKKSGCLKR YCECFQAKIL 180 CSENCKCVGC KNFRKCEERL ALSNGSNTKS TAFIKQTNSA ITDAVGFSGY RFSQKPRKRK 240 YLDSFLGSNR EGPPICRFTQ DQQVVGSAAL ASSKIIYRSL LAGTIQQQDM RELCSALVLV 300 SQTAKILADQ NGSVNVQTVR ENETASSLAN RDGETCLKTP EIQNVMPNDY LVRDQENKTS 360 NGDTHSGDAE IHKGVPMSPR TLSLLCDEKD MSFMPDDSSD QIKNHVSNTD VYAEQESLVL 420 VKFQNCLNRL ITRGNMKETE CFLSAKAETK NNESVNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 2e-93 | CPP family protein |