PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127249.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 388aa MW: 43874.1 Da PI: 7.9722

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.3	1.5e-49	27	152	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ XP_028127249.1 27 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSEN 120 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_028127249.1 121 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 152 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MAIAATTMSQ DDNSKDDHDQ HDHDMVMPGF RFHPTEEELI EFYLRRKVEG KRFNVELITF 60 LDLYRYDPWE LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT GADRMIRSEN 120 FRSIGLKKTL VFYSGKAPKG IRTSWIMNEY RLPHHETERL QKAEISLCRV YKRAGVEDHP 180 SLPRSLPTKA SSSRTTQSDK KQHCATNQTS IERFQAFVGH SQVEDTEKMS ETSGGSCSGS 240 GSGDIGTALG LSKQNSYIAL ASLASPPVAP PPARVEDDRV LISKQACPLV QNCSTVFTGT 300 SLLPQNPVDD FHRLLNFQQS SISQYHTHHQ YHASQFSTFQ PQSQSLPPFN MLPGPVSLPA 360 TTAAAFSDRL WEWNSITEGN KDYTSPFK

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MAIAATTMSQ DDNSKDDHDQ HDHDMVMPGF RFHPTEEELI EFYLRRKVEG KRFNVELITF  60
LDLYRYDPWE LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT GADRMIRSEN  120
FRSIGLKKTL VFYSGKAPKG IRTSWIMNEY RLPHHETERL QKAEISLCRV YKRAGVEDHP  180
SLPRSLPTKA SSSRTTQSDK KQHCATNQTS IERFQAFVGH SQVEDTEKMS ETSGGSCSGS  240
GSGDIGTALG LSKQNSYIAL ASLASPPVAP PPARVEDDRV LISKQACPLV QNCSTVFTGT  300
SLLPQNPVDD FHRLLNFQQS SISQYHTHHQ YHASQFSTFQ PQSQSLPPFN MLPGPVSLPA  360
TTAAAFSDRL WEWNSITEGN KDYTSPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-114	NAC family protein