PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126794.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 177aa    MW: 20541.4 Da    PI: 7.418
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.82.2e-143086557
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     ++t+eq+e+Le++F+++++p+ ++  e+ +      +++ +q+kvWFqN+R  ek+
  XP_028126794.1 30 MQYTTEQVEVLEKVFAECPNPTFSHQWEMIRDHpilsNIEPKQIKVWFQNHRCLEKQ 86
                    679*******************76555555555599****************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MERMGASHGG CSSRRCDVSG DPQEKCGKYM QYTTEQVEVL EKVFAECPNP TFSHQWEMIR  60
DHPILSNIEP KQIKVWFQNH RCLEKQKKEA TNIQLVNKKL TAANRLLKEE NDCLQKQVSH  120
LVYENEYMWQ QLKNVCSNPC MHRLLIFWES PATTDTSCEF AINSPQHSLR AANDPKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.11e-48HD-ZIP family protein