PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126176.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 300aa    MW: 34478.7 Da    PI: 9.451
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.34.4e-0733116988
            FAR1   9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHe 88 
                     + GF ++++ks      ++  +  + C ++g+ ++++k+ + ++++ r     +C++ + +k +k   ++ w ++ +   HnH+
  XP_028126176.1  33 RNGFVIVVQKSDGGGIRDRKPRLCLACERSGSYRNTQKNsRPRKKKARLIGTKKCECPFLLKGKKlatNDDWILIVVCGVHNHP 116
                     679999999999998888889999*******9999999843344444555455555555555554448***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MQDEDNNSSE TGVPLIFKSR DELIRWARQV RRRNGFVIVV QKSDGGGIRD RKPRLCLACE  60
RSGSYRNTQK NSRPRKKKAR LIGTKKCECP FLLKGKKLAT NDDWILIVVC GVHNHPAAEY  120
FEGHSYAGRL SHEETSLLVD MSKSMVRPSE ILVILKQRDD ANASTMKTIY NACHRYKVAE  180
KAGRSQMQQL LGQLAVNKYI EWHRSCVDTE IVIDLFFAHP TSLNLLHAFP KVFLMDCTYK  240
TNRYRFPLLE IVGVTSIDMT FSVAFAYLQY EKEDNYTWAL GLLRSVMDEN TFPSVIVTDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.24e-07FAR1 family protein