PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126050.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 352aa    MW: 41288.9 Da    PI: 7.9176
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.63.4e-076465291
            FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                    +++++  r+gC a++ +k+++ +gk+   +++++HnH+l+p
  XP_028126050.1  6 QKSKTRGRCGCGARFSIKLDRiSGKYIACDFVKHHNHDLVP 46
                    5677888*******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MRSTCQKSKT RGRCGCGARF SIKLDRISGK YIACDFVKHH NHDLVPQDCI HMLPSQRKIS  60
TTQAIEVELA SQSVIPLRSA YELFGRESGG RESLGFTKLD QKNYVRSKRQ KDLEYEEAGS  120
VLHYFRKKTV ENPSFFYAVQ LDCDEQISNV FWADAQMIMD YAQFGDVVTF DTTYKLNNEH  180
RPFGSFVGFN HHRETVIFDQ DAAMAKAISI VMPNTNHRLC TWHLMQNAVK HVSSVFDDVG  240
VKGVFSKFMH DIDDEEEFRI QWDQMLDKYD AFDNHWLEKT FRVKEKWGWP YIMNSWAAGM  300
STTQLSESFN AFLKDYLNCD HNLMEFFKHF ERCFMRRGIR NWKRSIICPK NC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-70FAR1 family protein