PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126036.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 288aa    MW: 33138.5 Da    PI: 6.3656
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1872.8e-2736124190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ +vGFs+rk++ +ks ++geit+rtfvCskeg r+++k++    r +r+etrtgC a + +k+ +  gk++v+++++ HnH+l+
  XP_028126036.1  36 EFYNSYGGRVGFSIRKEYAHKS-KTGEITSRTFVCSKEGLRKSNKRD-FAIRIPRPETRTGCGALMSIKLIRqIGKYRVINFVETHNHPLV 124
                     6******************999.7888******************99.99********************9989***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDDLTIATQM DVHGEDDTQC KSILGMEFDS EQLAYEFYNS YGGRVGFSIR KEYAHKSKTG  60
EITSRTFVCS KEGLRKSNKR DFAIRIPRPE TRTGCGALMS IKLIRQIGKY RVINFVETHN  120
HPLVVRACAY MLPSQRKIST SQYIEIDLAD DCGIPLRSSY ELMGRETGGR ECVGFLKNDQ  180
ENYLRTKKQR ILEFGEAGSI LKYFQDQTAQ NPSFFYSVQL DIEEQINSIF WTYARMIIDY  240
GQFGDDVTCD TTYKINRESR PFAIFVGFNN HRETIVFGAA LMYNETTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-58FAR1 family protein