PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124823.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 470aa MW: 50504.9 Da PI: 8.2102

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46	1e-14	97	136	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+C+C++s+Clk+YCeCfaag +C+ C+C++C+N+ e+ XP_028124823.1 97 KQKQCHCRNSRCLKLYCECFAAGIYCDA-CNCTNCHNNVEH 136 89***********************9.******9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEQSATVSDF PQRKLAKQLE STAMCRASAN AILPAHPQAQ LQAKLLALAK PQSPPPPPQS 60 KRQRRLRAAH PLPVATMESP KSQQQNNIEV KDGTPKKQKQ CHCRNSRCLK LYCECFAAGI 120 YCDACNCTNC HNNVEHDAAR QEAVGATLER NPNAFQPKIA NSPHKSQDGR AANAAINGAI 180 GTSHLGTLPA LKKRKNQKLF FGGTASDQSI HRITQFQQEN RLRAPATSSS LLSAPGSCTI 240 SASSMGSSKL IYRSPLADVL QSQDVKELCS LLVIVSAEAT KALAEKNGKM DKKGDQLESS 300 LVSSDQEKHS KVEDNVQTSI PDDCLSGDQV DTAGNSGSDG SDAQTGRPPS PSTLALMCDE 360 QDTMVMATGS PDAAASNGSL TNQSSQGQIF TELYAEQERI VLTKFWNFLN RLISCGSIKE 420 AMCSPSPKIK LGIQQEPENC VTTTKTETSH KELDGTSIVK SVDQVVAKMS

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEQSATVSDF PQRKLAKQLE STAMCRASAN AILPAHPQAQ LQAKLLALAK PQSPPPPPQS  60
KRQRRLRAAH PLPVATMESP KSQQQNNIEV KDGTPKKQKQ CHCRNSRCLK LYCECFAAGI  120
YCDACNCTNC HNNVEHDAAR QEAVGATLER NPNAFQPKIA NSPHKSQDGR AANAAINGAI  180
GTSHLGTLPA LKKRKNQKLF FGGTASDQSI HRITQFQQEN RLRAPATSSS LLSAPGSCTI  240
SASSMGSSKL IYRSPLADVL QSQDVKELCS LLVIVSAEAT KALAEKNGKM DKKGDQLESS  300
LVSSDQEKHS KVEDNVQTSI PDDCLSGDQV DTAGNSGSDG SDAQTGRPPS PSTLALMCDE  360
QDTMVMATGS PDAAASNGSL TNQSSQGQIF TELYAEQERI VLTKFWNFLN RLISCGSIKE  420
AMCSPSPKIK LGIQQEPENC VTTTKTETSH KELDGTSIVK SVDQVVAKMS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	99	KRQRRLRAAHPLPVATMESPKSQQQNNIEVKDGTPKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	6e-51	CPP family protein